Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.07□□□□□ -0.48
Rab28Q99KL7 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Gm24255-201ENSMUST00000104481 128 ntBASIC12.07□□□□□ -0.48
Rab28Q99KL7 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Gm9083-201ENSMUST00000120423 819 ntBASIC12.07□□□□□ -0.48
Rab28Q99KL7 Gm14832-201ENSMUST00000121289 322 ntBASIC12.07□□□□□ -0.48
Rab28Q99KL7 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Gm15547-201ENSMUST00000122152 333 ntBASIC12.07□□□□□ -0.48
Rab28Q99KL7 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rab28Q99KL7 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.07□□□□□ -0.48
Rab28Q99KL7 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.07□□□□□ -0.48
Rab28Q99KL7 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.07□□□□□ -0.48
Rab28Q99KL7 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Rab28Q99KL7 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Gm23270-201ENSMUST00000104055 131 ntBASIC12.06□□□□□ -0.48
Rab28Q99KL7 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Gm13350-201ENSMUST00000120519 479 ntBASIC12.06□□□□□ -0.48
Rab28Q99KL7 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Gm20482-202ENSMUST00000174729 825 ntBASIC12.06□□□□□ -0.48
Rab28Q99KL7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rab28Q99KL7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rab28Q99KL7 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC12.06□□□□□ -0.48
Rab28Q99KL7 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.06□□□□□ -0.48
Rab28Q99KL7 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Rab28Q99KL7 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rab28Q99KL7 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Rab28Q99KL7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rab28Q99KL7 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms