Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfc4Q99J62 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Gm19353-201ENSMUST00000184561 445 ntBASIC14.4□□□□□ -0.1
Rfc4Q99J62 Gm44126-201ENSMUST00000204831 514 ntBASIC14.4□□□□□ -0.1
Rfc4Q99J62 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.4□□□□□ -0.1
Rfc4Q99J62 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.4□□□□□ -0.1
Rfc4Q99J62 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.4□□□□□ -0.1
Rfc4Q99J62 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.4□□□□□ -0.1
Rfc4Q99J62 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rfc4Q99J62 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Rfc4Q99J62 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Gm15515-201ENSMUST00000117827 822 ntBASIC14.39□□□□□ -0.11
Rfc4Q99J62 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.39□□□□□ -0.11
Rfc4Q99J62 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Gm5369-201ENSMUST00000217499 588 ntBASIC14.39□□□□□ -0.11
Rfc4Q99J62 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc4Q99J62 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Gm9996-201ENSMUST00000070359 913 ntBASIC14.39□□□□□ -0.11
Rfc4Q99J62 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc4Q99J62 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc4Q99J62 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfc4Q99J62 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Rfc4Q99J62 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14.38□□□□□ -0.11
Rfc4Q99J62 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Gm14058-201ENSMUST00000116082 735 ntBASIC14.38□□□□□ -0.11
Rfc4Q99J62 Gm12165-201ENSMUST00000117047 342 ntBASIC14.38□□□□□ -0.11
Rfc4Q99J62 Gm13045-201ENSMUST00000119019 712 ntBASIC14.38□□□□□ -0.11
Rfc4Q99J62 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.38□□□□□ -0.11
Rfc4Q99J62 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.38□□□□□ -0.11
Rfc4Q99J62 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rfc4Q99J62 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms