Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Gm29396-201ENSMUST00000185659 716 ntBASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdha3Q91Y16 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Mospd4-201ENSMUST00000180618 576 ntBASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdha3Q91Y16 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Gm15703-201ENSMUST00000120250 880 ntBASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Gm5850-201ENSMUST00000192923 1206 ntBASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Gm38266-201ENSMUST00000194931 421 ntBASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Olfr284-202ENSMUST00000206647 966 ntBASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Gm18935-201ENSMUST00000212692 664 ntBASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdha3Q91Y16 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms