Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdha9Q91Y11 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Gm44292-201ENSMUST00000205194 2364 ntBASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Gm26956-201ENSMUST00000182176 986 ntBASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Gm27516-201ENSMUST00000184237 98 ntBASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Gm37391-201ENSMUST00000194891 2318 ntBASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdha9Q91Y11 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Gm6621-201ENSMUST00000193251 772 ntBASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdha9Q91Y11 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.27□□□□□ -0.28
Pcdha9Q91Y11 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pcdha9Q91Y11 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdha9Q91Y11 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdha9Q91Y11 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdha9Q91Y11 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Pcdha9Q91Y11 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdha9Q91Y11 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdha9Q91Y11 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdha9Q91Y11 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.27□□□□□ -0.28
Pcdha9Q91Y11 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.27□□□□□ -0.28
Pcdha9Q91Y11 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Gm28882-201ENSMUST00000185504 314 ntBASIC13.27□□□□□ -0.29
Pcdha9Q91Y11 Gm38266-201ENSMUST00000194931 421 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms