Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pcdhb20Q91XZ9 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm22543-201ENSMUST00000104347 94 ntBASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm13369-201ENSMUST00000119442 987 ntBASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm14660-201ENSMUST00000119809 575 ntBASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm16177-201ENSMUST00000120728 718 ntBASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm29161-201ENSMUST00000188250 699 ntBASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm30353-202ENSMUST00000195486 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm43438-201ENSMUST00000198133 379 ntBASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm44615-201ENSMUST00000206548 358 ntBASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm45841-201ENSMUST00000207700 164 ntBASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm8637-201ENSMUST00000212919 1085 ntBASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.67□□□□□ -0.38
Pcdhb20Q91XZ9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms