Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm17208-201ENSMUST00000168388 535 ntBASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Gm24196-201ENSMUST00000179161 110 ntBASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdhb4Q91XZ6 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Gm27486-201ENSMUST00000184923 80 ntBASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Gm10146-201ENSMUST00000072739 309 ntBASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.47□□□□□ -0.41
Pcdhb4Q91XZ6 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdhb4Q91XZ6 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb4Q91XZ6 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb4Q91XZ6 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb4Q91XZ6 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb4Q91XZ6 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb4Q91XZ6 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb4Q91XZ6 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb4Q91XZ6 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Pcdhb4Q91XZ6 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.46□□□□□ -0.42
Pcdhb4Q91XZ6 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pcdhb4Q91XZ6 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms