Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usb1Q91W78 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
Usb1Q91W78 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usb1Q91W78 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.42□□□□□ -0.42
Usb1Q91W78 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usb1Q91W78 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Usb1Q91W78 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usb1Q91W78 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usb1Q91W78 Gm22121-201ENSMUST00000175148 54 ntBASIC12.42□□□□□ -0.42
Usb1Q91W78 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.42□□□□□ -0.42
Usb1Q91W78 Gm37042-201ENSMUST00000193816 581 ntBASIC12.42□□□□□ -0.42
Usb1Q91W78 Gm43133-201ENSMUST00000197472 463 ntBASIC12.42□□□□□ -0.42
Usb1Q91W78 Gm43179-201ENSMUST00000198797 275 ntBASIC12.42□□□□□ -0.42
Usb1Q91W78 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.42□□□□□ -0.42
Usb1Q91W78 Gm32025-201ENSMUST00000217960 307 ntBASIC12.42□□□□□ -0.42
Usb1Q91W78 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usb1Q91W78 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.42□□□□□ -0.42
Usb1Q91W78 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usb1Q91W78 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Usb1Q91W78 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Usb1Q91W78 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usb1Q91W78 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usb1Q91W78 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Usb1Q91W78 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usb1Q91W78 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Usb1Q91W78 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usb1Q91W78 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usb1Q91W78 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usb1Q91W78 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usb1Q91W78 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Usb1Q91W78 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usb1Q91W78 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usb1Q91W78 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.41□□□□□ -0.42
Usb1Q91W78 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usb1Q91W78 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.41□□□□□ -0.42
Usb1Q91W78 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.41□□□□□ -0.42
Usb1Q91W78 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Usb1Q91W78 Gm12363-201ENSMUST00000122250 668 ntBASIC12.41□□□□□ -0.42
Usb1Q91W78 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.41□□□□□ -0.42
Usb1Q91W78 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.41□□□□□ -0.42
Usb1Q91W78 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.41□□□□□ -0.42
Usb1Q91W78 Gm43118-201ENSMUST00000199149 775 ntBASIC12.41□□□□□ -0.42
Usb1Q91W78 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Usb1Q91W78 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.41□□□□□ -0.42
Usb1Q91W78 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.41□□□□□ -0.42
Usb1Q91W78 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
Usb1Q91W78 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Usb1Q91W78 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.41□□□□□ -0.42
Usb1Q91W78 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Usb1Q91W78 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.41□□□□□ -0.42
Usb1Q91W78 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usb1Q91W78 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usb1Q91W78 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usb1Q91W78 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usb1Q91W78 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usb1Q91W78 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usb1Q91W78 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usb1Q91W78 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Usb1Q91W78 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usb1Q91W78 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.4□□□□□ -0.42
Usb1Q91W78 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.4□□□□□ -0.42
Usb1Q91W78 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usb1Q91W78 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usb1Q91W78 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.4□□□□□ -0.42
Usb1Q91W78 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Usb1Q91W78 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usb1Q91W78 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usb1Q91W78 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Usb1Q91W78 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usb1Q91W78 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usb1Q91W78 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Usb1Q91W78 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Usb1Q91W78 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Usb1Q91W78 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usb1Q91W78 Mir1247-201ENSMUST00000116706 82 ntBASIC12.4□□□□□ -0.42
Usb1Q91W78 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Usb1Q91W78 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.4□□□□□ -0.42
Usb1Q91W78 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms