Protein–RNA interactions for Protein: Q91VH2

Snx9, Sorting nexin-9, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx9Q91VH2 Gm11597-201ENSMUST00000121423 964 ntBASIC13.19□□□□□ -0.3
Snx9Q91VH2 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snx9Q91VH2 Gm27320-201ENSMUST00000184892 109 ntBASIC13.19□□□□□ -0.3
Snx9Q91VH2 Gm31256-201ENSMUST00000194705 506 ntBASIC13.19□□□□□ -0.3
Snx9Q91VH2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snx9Q91VH2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snx9Q91VH2 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.19□□□□□ -0.3
Snx9Q91VH2 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx9Q91VH2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.19□□□□□ -0.3
Snx9Q91VH2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.19□□□□□ -0.3
Snx9Q91VH2 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Snx9Q91VH2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snx9Q91VH2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.19□□□□□ -0.3
Snx9Q91VH2 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Snx9Q91VH2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx9Q91VH2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.19□□□□□ -0.3
Snx9Q91VH2 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx9Q91VH2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx9Q91VH2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx9Q91VH2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx9Q91VH2 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx9Q91VH2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snx9Q91VH2 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Snx9Q91VH2 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Snx9Q91VH2 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.18□□□□□ -0.3
Snx9Q91VH2 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.18□□□□□ -0.3
Snx9Q91VH2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.18□□□□□ -0.3
Snx9Q91VH2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Gm25043-201ENSMUST00000158604 212 ntBASIC13.18□□□□□ -0.3
Snx9Q91VH2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Snx9Q91VH2 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Gm20482-202ENSMUST00000174729 825 ntBASIC13.18□□□□□ -0.3
Snx9Q91VH2 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Snx9Q91VH2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.18□□□□□ -0.3
Snx9Q91VH2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snx9Q91VH2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.17□□□□□ -0.3
Snx9Q91VH2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.17□□□□□ -0.3
Snx9Q91VH2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Gm14999-201ENSMUST00000121039 624 ntBASIC13.17□□□□□ -0.3
Snx9Q91VH2 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Snx9Q91VH2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Gm37259-201ENSMUST00000193903 849 ntBASIC13.17□□□□□ -0.3
Snx9Q91VH2 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.17□□□□□ -0.3
Snx9Q91VH2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.17□□□□□ -0.3
Snx9Q91VH2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snx9Q91VH2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms