Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Gm9630-201ENSMUST00000178304 885 ntBASIC10.49□□□□□ -0.73
H1fooQ8VIK3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
H1fooQ8VIK3 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Pck2-205ENSMUST00000226352 2784 ntBASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Gm1335-201ENSMUST00000121653 386 ntBASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Gm16296-201ENSMUST00000159905 325 ntBASIC10.48□□□□□ -0.73
H1fooQ8VIK3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Gm26927-201ENSMUST00000182385 965 ntBASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Gm38230-201ENSMUST00000193572 1159 ntBASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Gm43818-201ENSMUST00000200605 466 ntBASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Gm24526-201ENSMUST00000082921 158 ntBASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
H1fooQ8VIK3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Gm16177-201ENSMUST00000120728 718 ntBASIC10.47□□□□□ -0.73
H1fooQ8VIK3 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms