Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh18Q8VHR0 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdh18Q8VHR0 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh18Q8VHR0 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh18Q8VHR0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh18Q8VHR0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh18Q8VHR0 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh18Q8VHR0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh18Q8VHR0 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pcdh18Q8VHR0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Gm37580-201ENSMUST00000192408 2800 ntBASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Gm13689-201ENSMUST00000119360 685 ntBASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Gm12341-201ENSMUST00000119724 503 ntBASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Gm27390-201ENSMUST00000184516 176 ntBASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh18Q8VHR0 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Mir6977-201ENSMUST00000184960 64 ntBASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh18Q8VHR0 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh18Q8VHR0 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms