Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Gm21854-201ENSMUST00000179901 471 ntBASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpa1Q8VEE4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Gm6458-201ENSMUST00000211573 635 ntBASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpa1Q8VEE4 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Rpa1Q8VEE4 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Gm14057-201ENSMUST00000120631 482 ntBASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Auts2-212ENSMUST00000178555 309 ntBASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Gm38223-201ENSMUST00000194484 695 ntBASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 AC159246.1-201ENSMUST00000214478 249 ntBASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rpa1Q8VEE4 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms