Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Proscos-202ENSMUST00000178990 666 ntBASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Gm37922-201ENSMUST00000195596 455 ntBASIC12.12□□□□□ -0.47
Rnf8Q8VC56 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rnf8Q8VC56 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Gm11803-201ENSMUST00000119966 444 ntBASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Gm8810-201ENSMUST00000172895 754 ntBASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Gm6091-201ENSMUST00000098307 165 ntBASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.11□□□□□ -0.47
Rnf8Q8VC56 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Gm29127-201ENSMUST00000188304 517 ntBASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rnf8Q8VC56 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms