Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cd109Q8R422 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd109Q8R422 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC17.57■□□□□ 0.4
Cd109Q8R422 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC17.57■□□□□ 0.4
Cd109Q8R422 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cd109Q8R422 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cd109Q8R422 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cd109Q8R422 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd109Q8R422 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd109Q8R422 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd109Q8R422 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd109Q8R422 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC17.57■□□□□ 0.4
Cd109Q8R422 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd109Q8R422 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cd109Q8R422 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cd109Q8R422 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cd109Q8R422 Gm37131-201ENSMUST00000192502 1561 ntBASIC17.56■□□□□ 0.4
Cd109Q8R422 Gm38355-201ENSMUST00000192514 1570 ntBASIC17.56■□□□□ 0.4
Cd109Q8R422 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cd109Q8R422 Gm15131-201ENSMUST00000119124 595 ntBASIC17.56■□□□□ 0.4
Cd109Q8R422 Gm15595-201ENSMUST00000120840 961 ntBASIC17.56■□□□□ 0.4
Cd109Q8R422 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cd109Q8R422 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC17.56■□□□□ 0.4
Cd109Q8R422 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd109Q8R422 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd109Q8R422 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd109Q8R422 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd109Q8R422 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd109Q8R422 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd109Q8R422 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cd109Q8R422 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd109Q8R422 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Cd109Q8R422 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd109Q8R422 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Cd109Q8R422 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC17.56■□□□□ 0.4
Cd109Q8R422 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd109Q8R422 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd109Q8R422 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd109Q8R422 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd109Q8R422 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cd109Q8R422 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC17.55■□□□□ 0.4
Cd109Q8R422 Gm12208-201ENSMUST00000122004 163 ntBASIC17.55■□□□□ 0.4
Cd109Q8R422 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC17.55■□□□□ 0.4
Cd109Q8R422 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Gm4797-201ENSMUST00000219075 1283 ntBASIC17.55■□□□□ 0.4
Cd109Q8R422 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC17.55■□□□□ 0.4
Cd109Q8R422 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Cd109Q8R422 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC17.55■□□□□ 0.4
Cd109Q8R422 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC17.55■□□□□ 0.4
Cd109Q8R422 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Gm44260-201ENSMUST00000204946 2094 ntBASIC17.55■□□□□ 0.4
Cd109Q8R422 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Gm28323-201ENSMUST00000186817 2499 ntBASIC17.55■□□□□ 0.4
Cd109Q8R422 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC17.55■□□□□ 0.4
Cd109Q8R422 Gm6397-201ENSMUST00000161973 1069 ntBASIC17.55■□□□□ 0.4
Cd109Q8R422 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC17.55■□□□□ 0.4
Cd109Q8R422 Gm9797-202ENSMUST00000218003 294 ntBASIC17.55■□□□□ 0.4
Cd109Q8R422 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Gm10288-201ENSMUST00000084614 537 ntBASIC17.55■□□□□ 0.4
Cd109Q8R422 Gm7551-201ENSMUST00000089593 1074 ntBASIC17.55■□□□□ 0.4
Cd109Q8R422 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cd109Q8R422 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cd109Q8R422 Gm37691-201ENSMUST00000192147 2573 ntBASIC17.54■□□□□ 0.4
Cd109Q8R422 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Cd109Q8R422 Gm44942-201ENSMUST00000096093 2072 ntBASIC17.54■□□□□ 0.4
Cd109Q8R422 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd109Q8R422 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd109Q8R422 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd109Q8R422 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd109Q8R422 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd109Q8R422 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cd109Q8R422 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC17.54■□□□□ 0.4
Cd109Q8R422 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd109Q8R422 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd109Q8R422 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cd109Q8R422 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cd109Q8R422 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cd109Q8R422 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Cd109Q8R422 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Cd109Q8R422 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cd109Q8R422 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms