Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Gm29155-201ENSMUST00000185910 269 ntBASIC14.11□□□□□ -0.15
Syne4Q8CII8 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Gm38210-201ENSMUST00000191944 809 ntBASIC14.11□□□□□ -0.15
Syne4Q8CII8 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Gm4157-201ENSMUST00000211647 679 ntBASIC14.11□□□□□ -0.15
Syne4Q8CII8 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.11□□□□□ -0.15
Syne4Q8CII8 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.11□□□□□ -0.15
Syne4Q8CII8 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.11□□□□□ -0.15
Syne4Q8CII8 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.11□□□□□ -0.15
Syne4Q8CII8 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Gm6781-201ENSMUST00000038304 1242 ntBASIC14.11□□□□□ -0.15
Syne4Q8CII8 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Syne4Q8CII8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Syne4Q8CII8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Gm14724-201ENSMUST00000118400 537 ntBASIC14.1□□□□□ -0.15
Syne4Q8CII8 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Syne4Q8CII8 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Gm2965-201ENSMUST00000198365 343 ntBASIC14.1□□□□□ -0.15
Syne4Q8CII8 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC14.1□□□□□ -0.15
Syne4Q8CII8 AC171241.1-201ENSMUST00000228144 1166 ntBASIC14.1□□□□□ -0.15
Syne4Q8CII8 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Syne4Q8CII8 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.09□□□□□ -0.15
Syne4Q8CII8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Gm8199-201ENSMUST00000121323 823 ntBASIC14.09□□□□□ -0.15
Syne4Q8CII8 Gm11675-201ENSMUST00000121873 832 ntBASIC14.09□□□□□ -0.15
Syne4Q8CII8 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Gm23119-201ENSMUST00000158610 140 ntBASIC14.09□□□□□ -0.15
Syne4Q8CII8 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.09□□□□□ -0.15
Syne4Q8CII8 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.09□□□□□ -0.15
Syne4Q8CII8 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.09□□□□□ -0.15
Syne4Q8CII8 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Syne4Q8CII8 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.09□□□□□ -0.15
Syne4Q8CII8 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Syne4Q8CII8 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms