Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.81□□□□□ -0.36
CopaQ8CIE6 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.81□□□□□ -0.36
CopaQ8CIE6 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.81□□□□□ -0.36
CopaQ8CIE6 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CopaQ8CIE6 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.8□□□□□ -0.36
CopaQ8CIE6 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Gm15370-201ENSMUST00000117158 253 ntBASIC12.8□□□□□ -0.36
CopaQ8CIE6 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Gm27243-201ENSMUST00000183964 521 ntBASIC12.8□□□□□ -0.36
CopaQ8CIE6 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.8□□□□□ -0.36
CopaQ8CIE6 Gm38241-201ENSMUST00000192641 898 ntBASIC12.8□□□□□ -0.36
CopaQ8CIE6 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.8□□□□□ -0.36
CopaQ8CIE6 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CopaQ8CIE6 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.79□□□□□ -0.36
CopaQ8CIE6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.79□□□□□ -0.36
CopaQ8CIE6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Gm13297-201ENSMUST00000120205 934 ntBASIC12.79□□□□□ -0.36
CopaQ8CIE6 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Gm7046-201ENSMUST00000221351 977 ntBASIC12.79□□□□□ -0.36
CopaQ8CIE6 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CopaQ8CIE6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CopaQ8CIE6 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.79□□□□□ -0.36
CopaQ8CIE6 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms