Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.09■□□□□ 0.01
Brf1Q8CFK2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Gm18304-201ENSMUST00000189162 546 ntBASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Gm37201-201ENSMUST00000191845 523 ntBASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Gm18935-201ENSMUST00000212692 664 ntBASIC15.09■□□□□ 0.01
Brf1Q8CFK2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Gm8227-201ENSMUST00000223306 571 ntBASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Morn2-202ENSMUST00000227729 656 ntBASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Brf1Q8CFK2 Gm44260-201ENSMUST00000204946 2094 ntBASIC15.08■□□□□ 0.01
Brf1Q8CFK2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Brf1Q8CFK2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Brf1Q8CFK2 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Brf1Q8CFK2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Brf1Q8CFK2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Brf1Q8CFK2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC15.08■□□□□ 0.01
Brf1Q8CFK2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Brf1Q8CFK2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Brf1Q8CFK2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.08■□□□□ 0
Brf1Q8CFK2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Brf1Q8CFK2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Brf1Q8CFK2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC15.08■□□□□ 0
Brf1Q8CFK2 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC15.08■□□□□ 0
Brf1Q8CFK2 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Brf1Q8CFK2 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC15.08■□□□□ 0
Brf1Q8CFK2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Brf1Q8CFK2 Gm14999-201ENSMUST00000121039 624 ntBASIC15.08■□□□□ 0
Brf1Q8CFK2 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Brf1Q8CFK2 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
Brf1Q8CFK2 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC15.08■□□□□ 0
Brf1Q8CFK2 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Brf1Q8CFK2 Gm27516-201ENSMUST00000184237 98 ntBASIC15.08■□□□□ 0
Brf1Q8CFK2 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC15.08■□□□□ 0
Brf1Q8CFK2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Brf1Q8CFK2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC15.08■□□□□ 0
Brf1Q8CFK2 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC15.08■□□□□ 0
Brf1Q8CFK2 Gm10076-201ENSMUST00000073238 384 ntBASIC15.08■□□□□ 0
Brf1Q8CFK2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Brf1Q8CFK2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC15.08■□□□□ 0
Brf1Q8CFK2 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Brf1Q8CFK2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC15.08■□□□□ 0
Brf1Q8CFK2 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15.08■□□□□ 0
Brf1Q8CFK2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Brf1Q8CFK2 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Brf1Q8CFK2 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Brf1Q8CFK2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Brf1Q8CFK2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Brf1Q8CFK2 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Brf1Q8CFK2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Brf1Q8CFK2 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC15.07■□□□□ 0
Brf1Q8CFK2 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Brf1Q8CFK2 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Brf1Q8CFK2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Brf1Q8CFK2 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.07■□□□□ 0
Brf1Q8CFK2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Brf1Q8CFK2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC15.07■□□□□ 0
Brf1Q8CFK2 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Brf1Q8CFK2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Brf1Q8CFK2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.07■□□□□ 0
Brf1Q8CFK2 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Brf1Q8CFK2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Brf1Q8CFK2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Brf1Q8CFK2 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.07■□□□□ 0
Brf1Q8CFK2 Gm13297-201ENSMUST00000120205 934 ntBASIC15.07■□□□□ 0
Brf1Q8CFK2 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.07■□□□□ 0
Brf1Q8CFK2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.07■□□□□ 0
Brf1Q8CFK2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.07■□□□□ 0
Brf1Q8CFK2 Gm37489-201ENSMUST00000191883 159 ntBASIC15.07■□□□□ 0
Brf1Q8CFK2 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.07■□□□□ 0
Brf1Q8CFK2 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.07■□□□□ 0
Brf1Q8CFK2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC15.07■□□□□ 0
Brf1Q8CFK2 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Brf1Q8CFK2 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.07■□□□□ 0
Brf1Q8CFK2 Gm24136-201ENSMUST00000083374 165 ntBASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms