Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc28aQ8CEI3 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Gm24231-201ENSMUST00000104315 133 ntBASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Gm10156-201ENSMUST00000122364 462 ntBASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Gm2231-201ENSMUST00000125661 612 ntBASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Proscos-202ENSMUST00000178990 666 ntBASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Rubie-203ENSMUST00000227803 2430 ntBASIC13.17□□□□□ -0.3
Ccdc28aQ8CEI3 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.16□□□□□ -0.3
Ccdc28aQ8CEI3 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28aQ8CEI3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc28aQ8CEI3 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28aQ8CEI3 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28aQ8CEI3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28aQ8CEI3 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28aQ8CEI3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Ccdc28aQ8CEI3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28aQ8CEI3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.15□□□□□ -0.3
Ccdc28aQ8CEI3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28aQ8CEI3 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28aQ8CEI3 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.15□□□□□ -0.3
Ccdc28aQ8CEI3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Ccdc28aQ8CEI3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.15□□□□□ -0.3
Ccdc28aQ8CEI3 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ccdc28aQ8CEI3 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.15□□□□□ -0.3
Ccdc28aQ8CEI3 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms