Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ccdc87Q8CDL9 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Gm11425-201ENSMUST00000119608 498 ntBASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Gm7561-201ENSMUST00000211203 886 ntBASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Gm9396-201ENSMUST00000076703 567 ntBASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.28□□□□□ -0.28
Ccdc87Q8CDL9 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc87Q8CDL9 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc87Q8CDL9 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Ccdc87Q8CDL9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Gm11803-201ENSMUST00000119966 444 ntBASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Gm24196-201ENSMUST00000179161 110 ntBASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Gm8598-201ENSMUST00000221184 836 ntBASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Ccdc87Q8CDL9 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Gm14760-201ENSMUST00000121831 999 ntBASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Gm8810-201ENSMUST00000172895 754 ntBASIC13.26□□□□□ -0.29
Ccdc87Q8CDL9 Proscos-202ENSMUST00000178990 666 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms