Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Lrif1Q8CDD9 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Gm42550-201ENSMUST00000201553 960 ntBASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Lrif1Q8CDD9 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Gm27839-201ENSMUST00000184242 106 ntBASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Gm18473-201ENSMUST00000220543 868 ntBASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Lrif1Q8CDD9 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms