Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
Eri3Q8C460 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Eri3Q8C460 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Eri3Q8C460 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Eri3Q8C460 Gm10434-201ENSMUST00000101158 471 ntBASIC11.89□□□□□ -0.51
Eri3Q8C460 Gm24231-201ENSMUST00000104315 133 ntBASIC11.89□□□□□ -0.51
Eri3Q8C460 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Eri3Q8C460 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.89□□□□□ -0.51
Eri3Q8C460 Gm11793-201ENSMUST00000120433 981 ntBASIC11.89□□□□□ -0.51
Eri3Q8C460 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.89□□□□□ -0.51
Eri3Q8C460 Gm13316-201ENSMUST00000140537 691 ntBASIC11.89□□□□□ -0.51
Eri3Q8C460 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Eri3Q8C460 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Eri3Q8C460 Gm38158-201ENSMUST00000194617 339 ntBASIC11.89□□□□□ -0.51
Eri3Q8C460 Gm43118-201ENSMUST00000199149 775 ntBASIC11.89□□□□□ -0.51
Eri3Q8C460 Gm6013-201ENSMUST00000212264 699 ntBASIC11.89□□□□□ -0.51
Eri3Q8C460 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Eri3Q8C460 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Eri3Q8C460 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Eri3Q8C460 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Eri3Q8C460 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Eri3Q8C460 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Eri3Q8C460 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Eri3Q8C460 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.89□□□□□ -0.51
Eri3Q8C460 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Eri3Q8C460 Cog3-203ENSMUST00000227473 4197 ntBASIC11.89□□□□□ -0.51
Eri3Q8C460 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Eri3Q8C460 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Eri3Q8C460 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Eri3Q8C460 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Eri3Q8C460 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.89□□□□□ -0.51
Eri3Q8C460 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Eri3Q8C460 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Eri3Q8C460 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Eri3Q8C460 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Eri3Q8C460 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Eri3Q8C460 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.88□□□□□ -0.51
Eri3Q8C460 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Eri3Q8C460 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Eri3Q8C460 Gm13736-201ENSMUST00000119272 253 ntBASIC11.88□□□□□ -0.51
Eri3Q8C460 Gm13315-201ENSMUST00000120376 991 ntBASIC11.88□□□□□ -0.51
Eri3Q8C460 Gm11597-201ENSMUST00000121423 964 ntBASIC11.88□□□□□ -0.51
Eri3Q8C460 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.88□□□□□ -0.51
Eri3Q8C460 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Mospd4-201ENSMUST00000180618 576 ntBASIC11.88□□□□□ -0.51
Eri3Q8C460 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.88□□□□□ -0.51
Eri3Q8C460 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Eri3Q8C460 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.88□□□□□ -0.51
Eri3Q8C460 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Eri3Q8C460 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.88□□□□□ -0.51
Eri3Q8C460 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Eri3Q8C460 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Eri3Q8C460 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC11.88□□□□□ -0.51
Eri3Q8C460 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.88□□□□□ -0.51
Eri3Q8C460 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Eri3Q8C460 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Eri3Q8C460 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Eri3Q8C460 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Eri3Q8C460 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Eri3Q8C460 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Eri3Q8C460 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Eri3Q8C460 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Eri3Q8C460 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Eri3Q8C460 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Eri3Q8C460 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Eri3Q8C460 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Eri3Q8C460 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Eri3Q8C460 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Eri3Q8C460 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Eri3Q8C460 Gm14760-201ENSMUST00000121831 999 ntBASIC11.87□□□□□ -0.51
Eri3Q8C460 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Eri3Q8C460 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Eri3Q8C460 Gm42693-201ENSMUST00000196779 631 ntBASIC11.87□□□□□ -0.51
Eri3Q8C460 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Eri3Q8C460 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Eri3Q8C460 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Eri3Q8C460 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Eri3Q8C460 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Eri3Q8C460 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Eri3Q8C460 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Eri3Q8C460 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms