Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm19309-201ENSMUST00000218295 205 ntBASIC12.15□□□□□ -0.46
Cpsf4Q8BQZ5 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4Q8BQZ5 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.15□□□□□ -0.46
Cpsf4Q8BQZ5 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4Q8BQZ5 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.15□□□□□ -0.46
Cpsf4Q8BQZ5 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.15□□□□□ -0.46
Cpsf4Q8BQZ5 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4Q8BQZ5 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4Q8BQZ5 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4Q8BQZ5 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.15□□□□□ -0.46
Cpsf4Q8BQZ5 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.15□□□□□ -0.46
Cpsf4Q8BQZ5 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.15□□□□□ -0.46
Cpsf4Q8BQZ5 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4Q8BQZ5 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4Q8BQZ5 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4Q8BQZ5 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cpsf4Q8BQZ5 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.15□□□□□ -0.47
Cpsf4Q8BQZ5 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Cpsf4Q8BQZ5 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cpsf4Q8BQZ5 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cpsf4Q8BQZ5 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Gm13813-201ENSMUST00000120998 787 ntBASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Gm26185-201ENSMUST00000157692 266 ntBASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Gm45880-201ENSMUST00000213041 853 ntBASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Gm19163-201ENSMUST00000223313 780 ntBASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cpsf4Q8BQZ5 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.13□□□□□ -0.47
Cpsf4Q8BQZ5 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms