Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.83□□□□□ -0.36
Chmp2bQ8BJF9 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Gm11803-201ENSMUST00000119966 444 ntBASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Gm10156-201ENSMUST00000122364 462 ntBASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Gm17208-201ENSMUST00000168388 535 ntBASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Gm22121-201ENSMUST00000175148 54 ntBASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Gm19184-201ENSMUST00000196798 928 ntBASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Chmp2bQ8BJF9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Gm8213-201ENSMUST00000118191 441 ntBASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Gm13369-201ENSMUST00000119442 987 ntBASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Gm23984-201ENSMUST00000157139 203 ntBASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Gm26185-201ENSMUST00000157692 266 ntBASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Gm37042-201ENSMUST00000193816 581 ntBASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chmp2bQ8BJF9 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms