Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm1335-201ENSMUST00000121653 386 ntBASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Gm27682-201ENSMUST00000183930 110 ntBASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Gm45784-201ENSMUST00000188360 142 ntBASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Gm40466-201ENSMUST00000212174 422 ntBASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Mir339-201ENSMUST00000083659 96 ntBASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Clrn3Q8BHH8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Daam2-202ENSMUST00000224595 1926 ntBASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Gm7029-201ENSMUST00000173226 450 ntBASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Clrn3Q8BHH8 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Clrn3Q8BHH8 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 135 ms