Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Gm16202-201ENSMUST00000117532 544 ntBASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Gm38223-201ENSMUST00000194484 695 ntBASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 AC225888.1-201ENSMUST00000227184 728 ntBASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Slc5a7Q8BGY9 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Gm6263-201ENSMUST00000120029 1342 ntBASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Gm44069-201ENSMUST00000204898 506 ntBASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Cog3-203ENSMUST00000227473 4197 ntBASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
Slc5a7Q8BGY9 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.92□□□□□ -0.66
Slc5a7Q8BGY9 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms