Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Gm8885-201ENSMUST00000189382 598 ntBASIC11.65□□□□□ -0.54
Pif1Q80SX8 Gm37201-201ENSMUST00000191845 523 ntBASIC11.65□□□□□ -0.54
Pif1Q80SX8 Gm44262-201ENSMUST00000204969 372 ntBASIC11.65□□□□□ -0.54
Pif1Q80SX8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.65□□□□□ -0.54
Pif1Q80SX8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Gm8712-201ENSMUST00000221090 701 ntBASIC11.65□□□□□ -0.54
Pif1Q80SX8 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.65□□□□□ -0.54
Pif1Q80SX8 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.65□□□□□ -0.54
Pif1Q80SX8 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pif1Q80SX8 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Pif1Q80SX8 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pif1Q80SX8 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.65□□□□□ -0.55
Pif1Q80SX8 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pif1Q80SX8 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Pif1Q80SX8 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pif1Q80SX8 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Pif1Q80SX8 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Pif1Q80SX8 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.64□□□□□ -0.55
Pif1Q80SX8 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.64□□□□□ -0.55
Pif1Q80SX8 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Gm45354-201ENSMUST00000199820 2557 ntBASIC11.64□□□□□ -0.55
Pif1Q80SX8 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Gm7857-201ENSMUST00000117957 358 ntBASIC11.64□□□□□ -0.55
Pif1Q80SX8 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.64□□□□□ -0.55
Pif1Q80SX8 Gm12176-201ENSMUST00000121420 875 ntBASIC11.64□□□□□ -0.55
Pif1Q80SX8 Gm12566-201ENSMUST00000121479 359 ntBASIC11.64□□□□□ -0.55
Pif1Q80SX8 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.64□□□□□ -0.55
Pif1Q80SX8 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.64□□□□□ -0.55
Pif1Q80SX8 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Gm25700-201ENSMUST00000177693 110 ntBASIC11.64□□□□□ -0.55
Pif1Q80SX8 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.64□□□□□ -0.55
Pif1Q80SX8 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.64□□□□□ -0.55
Pif1Q80SX8 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.64□□□□□ -0.55
Pif1Q80SX8 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.64□□□□□ -0.55
Pif1Q80SX8 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Gm6991-201ENSMUST00000218475 1178 ntBASIC11.64□□□□□ -0.55
Pif1Q80SX8 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pif1Q80SX8 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pif1Q80SX8 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pif1Q80SX8 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pif1Q80SX8 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms