Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Gm15276-201ENSMUST00000145953 498 ntBASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Gm27046-201ENSMUST00000182160 463 ntBASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Gm18827-201ENSMUST00000188341 790 ntBASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Gm37201-201ENSMUST00000191845 523 ntBASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdh8Q7TSK3 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Gm11930-201ENSMUST00000117788 190 ntBASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Gm12997-201ENSMUST00000120207 640 ntBASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Gm27023-201ENSMUST00000182372 285 ntBASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Gm13097-201ENSMUST00000210722 397 ntBASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Gm5363-201ENSMUST00000211927 938 ntBASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdh8Q7TSK3 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Gm3096-201ENSMUST00000185770 364 ntBASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Gm44967-201ENSMUST00000207047 631 ntBASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.36□□□□□ -0.43
Pcdh8Q7TSK3 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms