Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sh3d21Q7TSG5 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Gm5781-201ENSMUST00000219792 443 ntBASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Gm22058-201ENSMUST00000083393 310 ntBASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sh3d21Q7TSG5 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Gm25261-201ENSMUST00000157416 134 ntBASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Snora73a-201ENSMUST00000082453 205 ntBASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Gm26035-201ENSMUST00000083065 308 ntBASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sh3d21Q7TSG5 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3d21Q7TSG5 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3d21Q7TSG5 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3d21Q7TSG5 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.71□□□□□ -0.22
Sh3d21Q7TSG5 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Sh3d21Q7TSG5 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.71□□□□□ -0.22
Sh3d21Q7TSG5 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.71□□□□□ -0.22
Sh3d21Q7TSG5 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3d21Q7TSG5 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3d21Q7TSG5 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3d21Q7TSG5 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Sh3d21Q7TSG5 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3d21Q7TSG5 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3d21Q7TSG5 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Sh3d21Q7TSG5 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.71□□□□□ -0.22
Sh3d21Q7TSG5 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3d21Q7TSG5 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Sh3d21Q7TSG5 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3d21Q7TSG5 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3d21Q7TSG5 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3d21Q7TSG5 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3d21Q7TSG5 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3d21Q7TSG5 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3d21Q7TSG5 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3d21Q7TSG5 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3d21Q7TSG5 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3d21Q7TSG5 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.7□□□□□ -0.22
Sh3d21Q7TSG5 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Sh3d21Q7TSG5 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3d21Q7TSG5 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Sh3d21Q7TSG5 Rmrp-201ENSMUST00000157463 271 ntBASIC13.7□□□□□ -0.22
Sh3d21Q7TSG5 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.7□□□□□ -0.22
Sh3d21Q7TSG5 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.7□□□□□ -0.22
Sh3d21Q7TSG5 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Sh3d21Q7TSG5 Gm27514-201ENSMUST00000183692 110 ntBASIC13.7□□□□□ -0.22
Sh3d21Q7TSG5 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms