Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TwistnbQ78WZ7 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TwistnbQ78WZ7 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TwistnbQ78WZ7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TwistnbQ78WZ7 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
TwistnbQ78WZ7 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TwistnbQ78WZ7 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TwistnbQ78WZ7 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TwistnbQ78WZ7 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
TwistnbQ78WZ7 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TwistnbQ78WZ7 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms