Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11□□□□□ -0.65
Snrnp40Q6PE01 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11□□□□□ -0.65
Snrnp40Q6PE01 Acot6-202ENSMUST00000222921 3622 ntBASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Gm24891-201ENSMUST00000104391 136 ntBASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Gm9022-201ENSMUST00000182482 992 ntBASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Gm45550-201ENSMUST00000209380 946 ntBASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Gm807-202ENSMUST00000224929 408 ntBASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Gm26448-201ENSMUST00000082446 203 ntBASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Snrnp40Q6PE01 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Gm15881-201ENSMUST00000148792 942 ntBASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Gm43184-201ENSMUST00000197247 542 ntBASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Gm44958-201ENSMUST00000203734 736 ntBASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Gm5455-201ENSMUST00000058710 715 ntBASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Snrnp40Q6PE01 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms