Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Gm23363-201ENSMUST00000175024 79 ntBASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Proscos-202ENSMUST00000178990 666 ntBASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Gm19184-201ENSMUST00000196798 928 ntBASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Gm8099-201ENSMUST00000200510 742 ntBASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Gm7287-201ENSMUST00000205267 602 ntBASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 AC159006.1-201ENSMUST00000226396 258 ntBASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Smarcd3Q6P9Z1 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Smarcd3Q6P9Z1 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smarcd3Q6P9Z1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms