Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm26956-201ENSMUST00000182176 986 ntBASIC12.34□□□□□ -0.43
VclQ64727 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
VclQ64727 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.34□□□□□ -0.43
VclQ64727 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.34□□□□□ -0.43
VclQ64727 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
VclQ64727 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
VclQ64727 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.34□□□□□ -0.43
VclQ64727 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
VclQ64727 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.34□□□□□ -0.43
VclQ64727 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VclQ64727 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
VclQ64727 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
VclQ64727 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
VclQ64727 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
VclQ64727 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
VclQ64727 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.33□□□□□ -0.44
VclQ64727 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.33□□□□□ -0.44
VclQ64727 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.33□□□□□ -0.44
VclQ64727 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.33□□□□□ -0.44
VclQ64727 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
VclQ64727 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
VclQ64727 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.33□□□□□ -0.44
VclQ64727 Gm14723-201ENSMUST00000118686 215 ntBASIC12.33□□□□□ -0.44
VclQ64727 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.33□□□□□ -0.44
VclQ64727 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
VclQ64727 Gm2991-201ENSMUST00000173338 480 ntBASIC12.33□□□□□ -0.44
VclQ64727 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.33□□□□□ -0.44
VclQ64727 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.33□□□□□ -0.44
VclQ64727 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.33□□□□□ -0.44
VclQ64727 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.33□□□□□ -0.44
VclQ64727 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
VclQ64727 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.33□□□□□ -0.44
VclQ64727 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
VclQ64727 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
VclQ64727 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VclQ64727 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.32□□□□□ -0.44
VclQ64727 Gm12058-201ENSMUST00000118614 437 ntBASIC12.32□□□□□ -0.44
VclQ64727 Gm11964-201ENSMUST00000120982 444 ntBASIC12.32□□□□□ -0.44
VclQ64727 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
VclQ64727 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.32□□□□□ -0.44
VclQ64727 Gm2546-201ENSMUST00000182630 991 ntBASIC12.32□□□□□ -0.44
VclQ64727 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.32□□□□□ -0.44
VclQ64727 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.32□□□□□ -0.44
VclQ64727 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.32□□□□□ -0.44
VclQ64727 AC154171.1-201ENSMUST00000224610 643 ntBASIC12.32□□□□□ -0.44
VclQ64727 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
VclQ64727 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.32□□□□□ -0.44
VclQ64727 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Gm19221-201ENSMUST00000221827 1477 ntBASIC12.32□□□□□ -0.44
VclQ64727 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
VclQ64727 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VclQ64727 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms