Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.83□□□□□ -0.19
Ift88Q61371 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ift88Q61371 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ift88Q61371 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ift88Q61371 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ift88Q61371 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Ift88Q61371 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.83□□□□□ -0.2
Ift88Q61371 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.83□□□□□ -0.2
Ift88Q61371 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.83□□□□□ -0.2
Ift88Q61371 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.83□□□□□ -0.2
Ift88Q61371 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 Gm8515-201ENSMUST00000194852 576 ntBASIC13.83□□□□□ -0.2
Ift88Q61371 Gm45384-201ENSMUST00000210451 277 ntBASIC13.83□□□□□ -0.2
Ift88Q61371 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ift88Q61371 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ift88Q61371 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ift88Q61371 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ift88Q61371 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.82□□□□□ -0.2
Ift88Q61371 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.82□□□□□ -0.2
Ift88Q61371 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.82□□□□□ -0.2
Ift88Q61371 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Map1b-203ENSMUST00000223725 2669 ntBASIC13.82□□□□□ -0.2
Ift88Q61371 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ift88Q61371 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Gm11918-201ENSMUST00000121660 179 ntBASIC13.82□□□□□ -0.2
Ift88Q61371 Gm23984-201ENSMUST00000157139 203 ntBASIC13.82□□□□□ -0.2
Ift88Q61371 Auts2-212ENSMUST00000178555 309 ntBASIC13.82□□□□□ -0.2
Ift88Q61371 Gm27331-201ENSMUST00000183705 60 ntBASIC13.82□□□□□ -0.2
Ift88Q61371 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.82□□□□□ -0.2
Ift88Q61371 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.82□□□□□ -0.2
Ift88Q61371 Gm4768-201ENSMUST00000206199 686 ntBASIC13.82□□□□□ -0.2
Ift88Q61371 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.82□□□□□ -0.2
Ift88Q61371 Gm32025-201ENSMUST00000217960 307 ntBASIC13.82□□□□□ -0.2
Ift88Q61371 Gm19163-201ENSMUST00000223313 780 ntBASIC13.82□□□□□ -0.2
Ift88Q61371 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Gm6180-201ENSMUST00000065243 498 ntBASIC13.82□□□□□ -0.2
Ift88Q61371 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ift88Q61371 Gm10012-201ENSMUST00000078252 192 ntBASIC13.82□□□□□ -0.2
Ift88Q61371 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC13.82□□□□□ -0.2
Ift88Q61371 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ift88Q61371 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ift88Q61371 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ift88Q61371 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Cog3-203ENSMUST00000227473 4197 ntBASIC13.82□□□□□ -0.2
Ift88Q61371 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ift88Q61371 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC13.82□□□□□ -0.2
Ift88Q61371 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.81□□□□□ -0.2
Ift88Q61371 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ift88Q61371 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ift88Q61371 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Ift88Q61371 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.81□□□□□ -0.2
Ift88Q61371 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ift88Q61371 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ift88Q61371 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ift88Q61371 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ift88Q61371 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ift88Q61371 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms