Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Gm23119-201ENSMUST00000158610 140 ntBASIC12.81□□□□□ -0.36
Slc6a4Q60857 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.81□□□□□ -0.36
Slc6a4Q60857 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Gm44262-201ENSMUST00000204969 372 ntBASIC12.81□□□□□ -0.36
Slc6a4Q60857 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.81□□□□□ -0.36
Slc6a4Q60857 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.81□□□□□ -0.36
Slc6a4Q60857 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Slc6a4Q60857 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.8□□□□□ -0.36
Slc6a4Q60857 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Gm12015-201ENSMUST00000117065 843 ntBASIC12.8□□□□□ -0.36
Slc6a4Q60857 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Gm9083-201ENSMUST00000120423 819 ntBASIC12.8□□□□□ -0.36
Slc6a4Q60857 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.8□□□□□ -0.36
Slc6a4Q60857 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.8□□□□□ -0.36
Slc6a4Q60857 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Slc6a4Q60857 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Gm6963-201ENSMUST00000147879 379 ntBASIC12.8□□□□□ -0.36
Slc6a4Q60857 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Gm26361-201ENSMUST00000158868 186 ntBASIC12.8□□□□□ -0.36
Slc6a4Q60857 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Slc6a4Q60857 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Slc6a4Q60857 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.8□□□□□ -0.36
Slc6a4Q60857 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a4Q60857 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.8□□□□□ -0.36
Slc6a4Q60857 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Slc6a4Q60857 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a4Q60857 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Gm14130-201ENSMUST00000118417 987 ntBASIC12.79□□□□□ -0.36
Slc6a4Q60857 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.79□□□□□ -0.36
Slc6a4Q60857 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Gm44651-201ENSMUST00000207343 372 ntBASIC12.79□□□□□ -0.36
Slc6a4Q60857 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Slc6a4Q60857 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms