Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC13.23□□□□□ -0.29
Foxd4Q60688 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Foxd4Q60688 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Foxd4Q60688 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC13.22□□□□□ -0.29
Foxd4Q60688 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Gm18062-201ENSMUST00000208020 547 ntBASIC13.22□□□□□ -0.29
Foxd4Q60688 Gm18055-201ENSMUST00000208254 547 ntBASIC13.22□□□□□ -0.29
Foxd4Q60688 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.22□□□□□ -0.29
Foxd4Q60688 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.22□□□□□ -0.29
Foxd4Q60688 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.22□□□□□ -0.29
Foxd4Q60688 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.22□□□□□ -0.29
Foxd4Q60688 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.22□□□□□ -0.29
Foxd4Q60688 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Foxd4Q60688 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Foxd4Q60688 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Foxd4Q60688 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.21□□□□□ -0.29
Foxd4Q60688 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Gm5605-201ENSMUST00000208940 1305 ntBASIC13.21□□□□□ -0.29
Foxd4Q60688 Gm20121-201ENSMUST00000198547 1594 ntBASIC13.21□□□□□ -0.29
Foxd4Q60688 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Foxd4Q60688 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.21□□□□□ -0.29
Foxd4Q60688 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.21□□□□□ -0.29
Foxd4Q60688 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.21□□□□□ -0.29
Foxd4Q60688 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.21□□□□□ -0.29
Foxd4Q60688 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.21□□□□□ -0.29
Foxd4Q60688 Gm17150-201ENSMUST00000165577 381 ntBASIC13.21□□□□□ -0.29
Foxd4Q60688 Gm13147-202ENSMUST00000177526 1173 ntBASIC13.21□□□□□ -0.29
Foxd4Q60688 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Gm28450-201ENSMUST00000187349 638 ntBASIC13.21□□□□□ -0.29
Foxd4Q60688 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.21□□□□□ -0.29
Foxd4Q60688 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC13.21□□□□□ -0.29
Foxd4Q60688 Gm42550-201ENSMUST00000201553 960 ntBASIC13.21□□□□□ -0.29
Foxd4Q60688 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.21□□□□□ -0.29
Foxd4Q60688 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Foxd4Q60688 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.21□□□□□ -0.29
Foxd4Q60688 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 309.4 ms