Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Shroom1Q5SX79 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Shroom1Q5SX79 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Shroom1Q5SX79 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.33□□□□□ -0.28
Shroom1Q5SX79 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Shroom1Q5SX79 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Gm26361-201ENSMUST00000158868 186 ntBASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shroom1Q5SX79 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Gm14028-201ENSMUST00000117434 479 ntBASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Gm27023-201ENSMUST00000182372 285 ntBASIC13.31□□□□□ -0.28
Shroom1Q5SX79 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shroom1Q5SX79 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms