Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Vps13aQ5H8C4 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Gm18123-201ENSMUST00000210874 822 ntBASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Gm23680-201ENSMUST00000083162 164 ntBASIC12.06□□□□□ -0.48
Vps13aQ5H8C4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Gm17214-201ENSMUST00000164501 541 ntBASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Gm39288-201ENSMUST00000210554 446 ntBASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Gm24954-201ENSMUST00000178831 110 ntBASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Gm44958-201ENSMUST00000203734 736 ntBASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Vps13aQ5H8C4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Gm5599-201ENSMUST00000209602 788 ntBASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Gm8342-201ENSMUST00000209839 757 ntBASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Vps13aQ5H8C4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms