Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Gm9396-201ENSMUST00000076703 567 ntBASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 AC126262.1-201ENSMUST00000221802 1904 ntBASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Rnf20Q5DTM8 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Gm24548-201ENSMUST00000158650 108 ntBASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Gm44405-201ENSMUST00000198952 126 ntBASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Rnf20Q5DTM8 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Snora78-201ENSMUST00000158630 128 ntBASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Rnf20Q5DTM8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Gm27514-201ENSMUST00000183692 110 ntBASIC14.87□□□□□ -0.03
Rnf20Q5DTM8 Gm5370-201ENSMUST00000187187 574 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms