Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Arhgef40Q3UPH7 Gm5706-201ENSMUST00000181525 993 ntBASIC18.08■□□□□ 0.48
Arhgef40Q3UPH7 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Arhgef40Q3UPH7 Gm4034-201ENSMUST00000187674 480 ntBASIC18.08■□□□□ 0.48
Arhgef40Q3UPH7 Gm44270-201ENSMUST00000203084 1234 ntBASIC18.08■□□□□ 0.48
Arhgef40Q3UPH7 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Arhgef40Q3UPH7 AC122408.1-201ENSMUST00000218949 218 ntBASIC18.08■□□□□ 0.48
Arhgef40Q3UPH7 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Arhgef40Q3UPH7 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Arhgef40Q3UPH7 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Arhgef40Q3UPH7 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Mir1956-201ENSMUST00000157748 65 ntBASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Gm9873-201ENSMUST00000063891 1097 ntBASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Arhgef40Q3UPH7 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Gm11949-201ENSMUST00000117640 372 ntBASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Gm6485-201ENSMUST00000160676 439 ntBASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Gm18636-201ENSMUST00000218846 1066 ntBASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Prrxl1-205ENSMUST00000228878 723 ntBASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 AC123834.1-201ENSMUST00000225346 2043 ntBASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Arhgef40Q3UPH7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Gm15725-201ENSMUST00000119947 1090 ntBASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Gm21092-201ENSMUST00000178995 955 ntBASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Gm37299-201ENSMUST00000193951 826 ntBASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 AC098716.1-201ENSMUST00000213527 703 ntBASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Arhgef40Q3UPH7 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms