Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Gm24845-201ENSMUST00000158034 109 ntBASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Gm27023-201ENSMUST00000182372 285 ntBASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Gm9368-201ENSMUST00000219348 831 ntBASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Cts7-204ENSMUST00000225321 1257 ntBASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nhlrc4Q3UP44 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Gm12241-201ENSMUST00000118330 726 ntBASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Gm2991-201ENSMUST00000173338 480 ntBASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Gm45865-201ENSMUST00000211815 945 ntBASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 AC098716.1-201ENSMUST00000213527 703 ntBASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Nhlrc4Q3UP44 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Gm15198-201ENSMUST00000117283 177 ntBASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Gm44958-201ENSMUST00000203734 736 ntBASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Gm45331-201ENSMUST00000209868 554 ntBASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 Gm30285-201ENSMUST00000214614 422 ntBASIC11.47□□□□□ -0.57
Nhlrc4Q3UP44 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms