Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Nlrc4Q3UP24 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Gm11222-201ENSMUST00000119005 738 ntBASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Gm13570-201ENSMUST00000140763 309 ntBASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Gm3961-201ENSMUST00000204425 994 ntBASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 AC113031.8-201ENSMUST00000227856 631 ntBASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Nlrc4Q3UP24 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Gm23119-201ENSMUST00000158610 140 ntBASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Gm27023-201ENSMUST00000182372 285 ntBASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Mir6420-201ENSMUST00000185032 102 ntBASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Gm42937-201ENSMUST00000197360 752 ntBASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.18□□□□□ -0.3
Nlrc4Q3UP24 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Gm22323-201ENSMUST00000103832 109 ntBASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Gm24255-201ENSMUST00000104481 128 ntBASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Nlrc4Q3UP24 Gm24845-201ENSMUST00000158034 109 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms