Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Gm37542-201ENSMUST00000192563 2832 ntBASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Cks1brtQ3UNC9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Gm38037-201ENSMUST00000192600 1624 ntBASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Gm27628-201ENSMUST00000184911 107 ntBASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Gm21470-201ENSMUST00000187680 696 ntBASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Gm18206-201ENSMUST00000207027 926 ntBASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 AC156016.3-201ENSMUST00000228623 344 ntBASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Gm26660-202ENSMUST00000223620 4112 ntBASIC8.95□□□□□ -0.98
Cks1brtQ3UNC9 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Gm7862-201ENSMUST00000121461 292 ntBASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Rpph1-201ENSMUST00000175096 319 ntBASIC8.94□□□□□ -0.98
Cks1brtQ3UNC9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms