Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Rnf44Q3UHJ8 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Gm12314-201ENSMUST00000118104 538 ntBASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Gm37201-201ENSMUST00000191845 523 ntBASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Gm9368-201ENSMUST00000219348 831 ntBASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf44Q3UHJ8 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Gm39404-201ENSMUST00000216350 313 ntBASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Cts7-204ENSMUST00000225321 1257 ntBASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf44Q3UHJ8 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms