Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm14760-201ENSMUST00000121831 999 ntBASIC11.79□□□□□ -0.52
Brf2Q3UAW9 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.79□□□□□ -0.52
Brf2Q3UAW9 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Gm5904-201ENSMUST00000210286 865 ntBASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 AC114008.2-201ENSMUST00000227699 1347 ntBASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Brf2Q3UAW9 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Gm24231-201ENSMUST00000104315 133 ntBASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Gm12502-201ENSMUST00000120197 444 ntBASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Gm18584-201ENSMUST00000203098 964 ntBASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Gm6266-201ENSMUST00000203844 806 ntBASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Brf2Q3UAW9 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Brf2Q3UAW9 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Brf2Q3UAW9 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Brf2Q3UAW9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Brf2Q3UAW9 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.77□□□□□ -0.52
Brf2Q3UAW9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Brf2Q3UAW9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Gm12384-201ENSMUST00000119228 919 ntBASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Brf2Q3UAW9 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms