Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Gm12857-201ENSMUST00000117678 592 ntBASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Gm11956-201ENSMUST00000119525 512 ntBASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Gm22144-201ENSMUST00000157402 102 ntBASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Gm29155-201ENSMUST00000185910 269 ntBASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Gm28686-201ENSMUST00000187404 609 ntBASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Gm25517-201ENSMUST00000083865 134 ntBASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Chrna5Q2MKA5 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Gm4157-201ENSMUST00000211647 679 ntBASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 AC129219.2-201ENSMUST00000224324 701 ntBASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chrna5Q2MKA5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Gm14724-201ENSMUST00000118400 537 ntBASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Gm12899-201ENSMUST00000120565 551 ntBASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Gm15595-201ENSMUST00000120840 961 ntBASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 AC174797.2-202ENSMUST00000225729 568 ntBASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chrna5Q2MKA5 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms