Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Gm11979-201ENSMUST00000119629 743 ntBASIC13.27□□□□□ -0.29
Col19a1Q0VF58 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 Gm26989-201ENSMUST00000182608 749 ntBASIC13.27□□□□□ -0.29
Col19a1Q0VF58 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.27□□□□□ -0.29
Col19a1Q0VF58 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.27□□□□□ -0.29
Col19a1Q0VF58 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col19a1Q0VF58 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Gm12218-201ENSMUST00000117666 399 ntBASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Gm8731-201ENSMUST00000118088 412 ntBASIC13.26□□□□□ -0.29
Col19a1Q0VF58 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Gm18201-201ENSMUST00000174735 875 ntBASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Gm21092-201ENSMUST00000178995 955 ntBASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Mir6407-201ENSMUST00000184510 101 ntBASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.26□□□□□ -0.29
Col19a1Q0VF58 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Col19a1Q0VF58 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Gm18367-201ENSMUST00000176139 600 ntBASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Gm43752-201ENSMUST00000198475 697 ntBASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.25□□□□□ -0.29
Col19a1Q0VF58 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Gm44958-201ENSMUST00000203734 736 ntBASIC13.25□□□□□ -0.29
Col19a1Q0VF58 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms