Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Chd8Q09XV5 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chd8Q09XV5 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chd8Q09XV5 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chd8Q09XV5 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Gm23745-201ENSMUST00000104230 125 ntBASIC11.14□□□□□ -0.63
Chd8Q09XV5 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC11.14□□□□□ -0.63
Chd8Q09XV5 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Chd8Q09XV5 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.14□□□□□ -0.63
Chd8Q09XV5 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Chd8Q09XV5 CT025603.1-201ENSMUST00000224040 448 ntBASIC11.14□□□□□ -0.63
Chd8Q09XV5 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 AC166836.1-201ENSMUST00000219933 1795 ntBASIC11.14□□□□□ -0.63
Chd8Q09XV5 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Gm23612-201ENSMUST00000103823 110 ntBASIC11.14□□□□□ -0.63
Chd8Q09XV5 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Gm23576-201ENSMUST00000179918 110 ntBASIC11.14□□□□□ -0.63
Chd8Q09XV5 Gm6946-201ENSMUST00000182237 987 ntBASIC11.14□□□□□ -0.63
Chd8Q09XV5 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.14□□□□□ -0.63
Chd8Q09XV5 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC11.13□□□□□ -0.63
Chd8Q09XV5 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC11.13□□□□□ -0.63
Chd8Q09XV5 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.13□□□□□ -0.63
Chd8Q09XV5 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.13□□□□□ -0.63
Chd8Q09XV5 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.13□□□□□ -0.63
Chd8Q09XV5 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Chd8Q09XV5 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 238.1 ms