Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Gm1335-201ENSMUST00000121653 386 ntBASIC12.59□□□□□ -0.39
Pfdn6Q03958 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.59□□□□□ -0.39
Pfdn6Q03958 Gm29127-201ENSMUST00000188304 517 ntBASIC12.59□□□□□ -0.39
Pfdn6Q03958 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.59□□□□□ -0.39
Pfdn6Q03958 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pfdn6Q03958 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pfdn6Q03958 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pfdn6Q03958 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pfdn6Q03958 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pfdn6Q03958 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pfdn6Q03958 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pfdn6Q03958 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Gm15824-201ENSMUST00000119516 955 ntBASIC12.58□□□□□ -0.4
Pfdn6Q03958 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.58□□□□□ -0.4
Pfdn6Q03958 Gm12363-201ENSMUST00000122250 668 ntBASIC12.58□□□□□ -0.4
Pfdn6Q03958 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Gm8602-201ENSMUST00000184045 607 ntBASIC12.58□□□□□ -0.4
Pfdn6Q03958 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.58□□□□□ -0.4
Pfdn6Q03958 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.58□□□□□ -0.4
Pfdn6Q03958 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.58□□□□□ -0.4
Pfdn6Q03958 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pfdn6Q03958 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.57□□□□□ -0.4
Pfdn6Q03958 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.57□□□□□ -0.4
Pfdn6Q03958 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.57□□□□□ -0.4
Pfdn6Q03958 Gm12384-201ENSMUST00000119228 919 ntBASIC12.57□□□□□ -0.4
Pfdn6Q03958 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms