Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.44□□□□□ -0.58
Scn1bP97952 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Scn1bP97952 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Scn1bP97952 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.44□□□□□ -0.58
Scn1bP97952 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.43□□□□□ -0.58
Scn1bP97952 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.43□□□□□ -0.58
Scn1bP97952 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Scn1bP97952 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.43□□□□□ -0.58
Scn1bP97952 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Scn1bP97952 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Scn1bP97952 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Scn1bP97952 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.43□□□□□ -0.58
Scn1bP97952 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.43□□□□□ -0.58
Scn1bP97952 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.43□□□□□ -0.58
Scn1bP97952 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.43□□□□□ -0.58
Scn1bP97952 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.43□□□□□ -0.58
Scn1bP97952 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.43□□□□□ -0.58
Scn1bP97952 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.43□□□□□ -0.58
Scn1bP97952 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.43□□□□□ -0.58
Scn1bP97952 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.43□□□□□ -0.58
Scn1bP97952 Gm12403-201ENSMUST00000121384 959 ntBASIC11.43□□□□□ -0.58
Scn1bP97952 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Scn1bP97952 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.43□□□□□ -0.58
Scn1bP97952 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.43□□□□□ -0.58
Scn1bP97952 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.43□□□□□ -0.58
Scn1bP97952 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.43□□□□□ -0.58
Scn1bP97952 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.43□□□□□ -0.58
Scn1bP97952 Mir6956-201ENSMUST00000183598 62 ntBASIC11.43□□□□□ -0.58
Scn1bP97952 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Scn1bP97952 Gm17795-201ENSMUST00000214505 757 ntBASIC11.43□□□□□ -0.58
Scn1bP97952 Gm7775-201ENSMUST00000218871 853 ntBASIC11.43□□□□□ -0.58
Scn1bP97952 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC11.43□□□□□ -0.58
Scn1bP97952 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Gm9063-201ENSMUST00000223299 582 ntBASIC11.43□□□□□ -0.58
Scn1bP97952 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.43□□□□□ -0.58
Scn1bP97952 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Scn1bP97952 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Scn1bP97952 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Scn1bP97952 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Scn1bP97952 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.43□□□□□ -0.58
Scn1bP97952 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Scn1bP97952 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
Scn1bP97952 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Scn1bP97952 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Scn1bP97952 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scn1bP97952 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scn1bP97952 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scn1bP97952 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scn1bP97952 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scn1bP97952 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scn1bP97952 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scn1bP97952 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scn1bP97952 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scn1bP97952 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scn1bP97952 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scn1bP97952 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scn1bP97952 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scn1bP97952 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scn1bP97952 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.42□□□□□ -0.58
Scn1bP97952 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Scn1bP97952 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.42□□□□□ -0.58
Scn1bP97952 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.42□□□□□ -0.58
Scn1bP97952 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.42□□□□□ -0.58
Scn1bP97952 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.42□□□□□ -0.58
Scn1bP97952 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.42□□□□□ -0.58
Scn1bP97952 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Scn1bP97952 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scn1bP97952 Gm27772-201ENSMUST00000184900 187 ntBASIC11.42□□□□□ -0.58
Scn1bP97952 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.42□□□□□ -0.58
Scn1bP97952 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Scn1bP97952 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms