Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.38□□□□□ -0.75
Gfra1P97785 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.38□□□□□ -0.75
Gfra1P97785 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.38□□□□□ -0.75
Gfra1P97785 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Gfra1P97785 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Gfra1P97785 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.37□□□□□ -0.75
Gfra1P97785 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Gfra1P97785 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.37□□□□□ -0.75
Gfra1P97785 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.37□□□□□ -0.75
Gfra1P97785 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.37□□□□□ -0.75
Gfra1P97785 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC10.37□□□□□ -0.75
Gfra1P97785 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Gm16296-201ENSMUST00000159905 325 ntBASIC10.37□□□□□ -0.75
Gfra1P97785 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.37□□□□□ -0.75
Gfra1P97785 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Gfra1P97785 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC10.37□□□□□ -0.75
Gfra1P97785 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Gfra1P97785 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Gm37648-201ENSMUST00000192072 2563 ntBASIC10.37□□□□□ -0.75
Gfra1P97785 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.37□□□□□ -0.75
Gfra1P97785 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC10.37□□□□□ -0.75
Gfra1P97785 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Gfra1P97785 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
Gfra1P97785 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
Gfra1P97785 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.36□□□□□ -0.75
Gfra1P97785 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.36□□□□□ -0.75
Gfra1P97785 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Gfra1P97785 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC10.36□□□□□ -0.75
Gfra1P97785 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.36□□□□□ -0.75
Gfra1P97785 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.36□□□□□ -0.75
Gfra1P97785 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.36□□□□□ -0.75
Gfra1P97785 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.36□□□□□ -0.75
Gfra1P97785 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
Gfra1P97785 Gm37259-201ENSMUST00000193903 849 ntBASIC10.36□□□□□ -0.75
Gfra1P97785 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.36□□□□□ -0.75
Gfra1P97785 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.36□□□□□ -0.75
Gfra1P97785 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.36□□□□□ -0.75
Gfra1P97785 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Gfra1P97785 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Gfra1P97785 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Gfra1P97785 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.36□□□□□ -0.75
Gfra1P97785 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Gfra1P97785 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Gfra1P97785 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms