Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Thumpd3P97770 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Thumpd3P97770 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Thumpd3P97770 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Thumpd3P97770 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Thumpd3P97770 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Thumpd3P97770 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Thumpd3P97770 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Thumpd3P97770 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Gm16202-201ENSMUST00000117532 544 ntBASIC12.74□□□□□ -0.37
Thumpd3P97770 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.74□□□□□ -0.37
Thumpd3P97770 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.74□□□□□ -0.37
Thumpd3P97770 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.74□□□□□ -0.37
Thumpd3P97770 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.74□□□□□ -0.37
Thumpd3P97770 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Thumpd3P97770 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Thumpd3P97770 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.74□□□□□ -0.37
Thumpd3P97770 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Thumpd3P97770 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Thumpd3P97770 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thumpd3P97770 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thumpd3P97770 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thumpd3P97770 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thumpd3P97770 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Thumpd3P97770 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thumpd3P97770 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Thumpd3P97770 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Thumpd3P97770 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Thumpd3P97770 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Thumpd3P97770 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Thumpd3P97770 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.73□□□□□ -0.37
Thumpd3P97770 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.73□□□□□ -0.37
Thumpd3P97770 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.73□□□□□ -0.37
Thumpd3P97770 Gm14350-201ENSMUST00000116642 640 ntBASIC12.73□□□□□ -0.37
Thumpd3P97770 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Thumpd3P97770 Gm12384-201ENSMUST00000119228 919 ntBASIC12.73□□□□□ -0.37
Thumpd3P97770 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Thumpd3P97770 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.73□□□□□ -0.37
Thumpd3P97770 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.73□□□□□ -0.37
Thumpd3P97770 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.73□□□□□ -0.37
Thumpd3P97770 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.73□□□□□ -0.37
Thumpd3P97770 Gm42693-201ENSMUST00000196779 631 ntBASIC12.73□□□□□ -0.37
Thumpd3P97770 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.73□□□□□ -0.37
Thumpd3P97770 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.73□□□□□ -0.37
Thumpd3P97770 Gm8598-201ENSMUST00000221184 836 ntBASIC12.73□□□□□ -0.37
Thumpd3P97770 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thumpd3P97770 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Thumpd3P97770 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thumpd3P97770 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thumpd3P97770 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.73□□□□□ -0.37
Thumpd3P97770 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thumpd3P97770 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Thumpd3P97770 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thumpd3P97770 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thumpd3P97770 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.72□□□□□ -0.37
Thumpd3P97770 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Thumpd3P97770 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Thumpd3P97770 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thumpd3P97770 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.72□□□□□ -0.37
Thumpd3P97770 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thumpd3P97770 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.72□□□□□ -0.37
Thumpd3P97770 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thumpd3P97770 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.72□□□□□ -0.37
Thumpd3P97770 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thumpd3P97770 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thumpd3P97770 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Thumpd3P97770 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.72□□□□□ -0.37
Thumpd3P97770 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Thumpd3P97770 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thumpd3P97770 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thumpd3P97770 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Thumpd3P97770 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Thumpd3P97770 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Thumpd3P97770 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Thumpd3P97770 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms